Alessandro Sulis, Francesca Frexia, Vittorio Meloni, Massimo Gaggero, Mauro Del Rio, Riccardo Triunfo, Daniela Ghironi, Federico Caboni, Gianluigi Zanetti

EJBI - European Journal for Biomedical Informatics EuroMISE sr.o. pages en36--en44 vol. 12 - 2016

[2-ABB16]

Making sense of big data in health research: Towards an EU action plan

Charles Auffrey, Rudi Bailing, Ines Barroso, Laszlo Bencze, Mikael Benson, Jay Bergeron, Enrique Bernal-Delgado, Niklas Blomberg, Christhop Bock, Ana Conesa, Susanna Del Signore, Christhophe Delogne, Peter Devilee, Alberto Di Meglio, Marinus Eijkemans, Paul Flicek, Norbert Graf, Vera Grimm, Henk-Jan Guchelaar, Yi-Ke Guo, Ivo Glynne Gut, Allan Hanbury, Shahid Hanif, Ralf-Dieter Hilgers, Angel Honrado, D. Rod Hose, Jeanine Houwing-Duistemaat, Tim Hubbard, Sophie Helen Janacek, Haralampos Karanikas, Tim Kievits, Manfred Kohler, Andreas Kremer, Jerry Lanfear, Thomas Lengauer, Theo Meert, Edith Maes, Werner Mueller, Dorthe Nickel, Peter Oledzki, Bertrand Pedersen, Milan Petkovic, Kostantinos Pliakos, Magnus Rattray, Josep Redon i mas, Reinhard Schneider, Thierry Sengstag, Xavier Serra-Picamal, Wouter Spek, Lea Vaas, Okker van Batemburg, Marc Vandelaer, Peter Varnai, Pablo Vollioalada, Juan Antonio Vizcaino, John Wubbe, Gianluigi Zanetti

Genome Medicine pages 1--13 vol. 8 num. 71 - 2016 doi: 10.1186/s13073-016-0323-y

[2-DLF16]

A Scalable Data Access Layer to Manage Structured Heterogeneous Biomedical Data

Giovanni Delussu, Luca Lianas, Francesca Frexia, Gianluigi Zanetti

PLoS ONE plos one - december 2016 doi: 10.1371/journal.pone.0168004

[2-LPM16]

CyTest - A new platform for training and testing in cytopathology

Luca Lianas, Marco Enrico Piras, Elodia Musu, Simona Podda, Francesca Frexia, Emanuela Ovcin, Giovanni Bussolati, Gianluigi Zanetti

The Diagnostic pathology Journal pages 208 vol. 2 - august 2016
issn: 2364 - 4893 doi: 10.17629/www.diagnosticpathology.eu-2016-2:208

[2-LPM16]

CyTest – An Innovative Open-source Platform for Training and Testing in Cythopathology

Luca Lianas, Marco Enrico Piras, Elodia Musu, Simona Podda, Francesca Frexia, Emanuela Ovcin, Giovanni Bussolati, Gianluigi Zanetti

Procedia - Social and Behavioral Sciences pages 674–681 vol. 228 - july 2016 doi: 10.1016/j.sbspro.2016.07.103

Peer-reviewed publications in international events

[4-BCP16]

Spectral coherence analysis in EEG nocturnal epilepsy recordings

Giovanni Busonera, Marco Cogoni, M. Puligheddu, F. Marrosu, Gianluigi Zanetti

JOURNAL OF SLEEP RESEARCH WILEY-BLACKWELL JOURNAL OF SLEEP RESEARCH pages 160 vol. 25 - 2016

[4-CBP16]

Graph-theoretic analysis of nocturnal EEG recordings for NFLE patients and controls

Marco Cogoni, Giovanni Busonera, M. Puligheddu, F. Marrosu, Gianluigi Zanetti

JOURNAL OF SLEEP RESEARCH WILEY-BLACKWELL JOURNAL OF SLEEP RESEARCH pages 254 vol. 25 - 2016

[4-VPZ16]

Scalable genomics: from raw data to aligned reads on Apache YARN

Francesco Versaci, Luca Pireddu, Gianluigi Zanetti

IEEE BigData - 2016

Various talks, works and publications

[2-CBZ16]

Ultrametricity of optimal transport substates for multiple interacting paths over a square lattice network

Marco Cogoni, Giovanni Busonera, Gianluigi Zanetti

arXiv:1611.04918 Cornell University Library - 2016 doi: arXiv:1611.04918

[6-CAL16]

A robust and extensible framework for tracking biodata provenance, analysis workflows and results

Gianmauro Cuccuru, Rossano Atzeni, Luca Lianas, Ricardo Medda, Luca Pireddu, Paolo Uva, Ilenia Zara, Gianluigi Zanetti, Giorgio Fotia

Poster presentation at Nettab, October 2016, Rome - october 2016

[6-PVZ16]

Scalable genomics: from Raw Data to Aligned Reads on Apache Yarn

Luca Pireddu, Francesco Versaci, Gianluigi Zanetti

Poster presentation at Big Data In Biology and Health, EMBL Heidelberg, Germany. - september 2016

[6-VPZ16]

Flink in Genomics: Efficient and scalable processing of raw Illumina BCL data

Francesco Versaci, Luca Pireddu, Gianluigi Zanetti

Presentation at workshop FlinkForward 2016 - FlinkForward 2016 - september 2016

[6-PZ16]

The RAPI Read Aligner API

Luca Pireddu, Gianluigi Zanetti

Presentation at ISCB NGS 2016 - - april 2016

[2-VPZ16]

Scalable genomics: from raw data to aligned reads on Apache YARN

Francesco Versaci, Luca Pireddu, Gianluigi Zanetti

bioRxiv Cold Spring Harbor Labs Journals - february 2016 doi: 10.1101/071092

Publications en 2015

Peer-reviewed publications in International Journals

[2-MSG15]

HL7apy: a Python library to parse, create and handle HL7 v2.x messages

Vittorio Meloni, Alessandro Sulis, Daniela Ghironi, Francesco Cabras, Mauro Del Rio, Stefano Leone Monni, Massimo Gaggero, Francesca Frexia, Gianluigi Zanetti

EJBI - European Journal for Biomedical Informatics EuroMISE s.r.o. pages en31-en40 vol. 11 num. 2 - january 2015
issn: 1801 - 5603

Peer-reviewed publications in international events

[4-SDF15]

Process Mining applied to Laboratory Workflow: a comparison between two sites

Alessandro Sulis, Mauro Del Rio, Francesca Frexia, Paolo Anedda, Giovanni Busonera, Marco Cogoni, Gianluigi Zanetti

ICHI '15 Proceedings of the 2015 International Conference on Healthcare Informatics IEEE Computer Society Washington, DC, USA ©2015 Digital Library pages 437-443 ACM Press ACM - october 2015
isbn: 978-1-4673-9548-9

Peer-reviewed publications in national events

[5-CBZ15]

Graph-theoretic analysis of nocturnal EEG recordings for NFLE patients and controls

Marco Cogoni, Giovanni Busonera, Gianluigi Zanetti

Ricerca traslazionale e nuove Frontiere della terapia nella Medicina del Sonno AIMS - 2015

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