Publications de Reinier au CRS4

Publications en 2015

Peer-reviewed publications in International Journals

[2-RZH15]

Mandibular hypoplasia, deafness, progeroid features and lipodystrophy (MDPL) syndrome in the context of inherited lipodystrophies

Frederic Reinier, Magdalena Zoledziewska, David Hanna, Josh D Smith, Maria Valentini, Ilenia Zara, Riccardo Berutti, Serena Sanna, Manuela Oppo, Roberto Cusano, Rosanna Satta, Maria Antonietta Montesu, Christopher M. S. Jones, Decio Cerimele, Debby A. Nickerson, Andrea Angius, Francesco Cucca, F. Cottoni, Laura Crisponi

Metabolism - 2015 doi: 10.1016/j.metabol.2015.07.022 Share on mendeley

[2-CBM15]

Genome sequencing elucidates Sardinian genetic architecture and augments association analyses for lipid and blood inflammatory markers

Sidore Carlo, Fabio Busonero, Andrea Maschio, Eleonora Porcu, Silvia Naitza, Magdalena Zoledziewska, Antonella Mulas, Giorgio Pistis, Maristella Steri, Fabrice Danjou, Alan Kwong , Rossano Atzeni, Riccardo Berutti, Frederic Reinier, Christopher M. S. Jones, Andrea Angius, Hyun Kang , John Novembre, Serena Sanna, David Schlessinger, Francesco Cucca, Gonçalo R. Abecasis

Nature Genetics - 2015

Publications en 2014

Peer-reviewed publications in International Journals

[2-1AJ14]

Human genomic regions with exceptionally high levels of population differentiation identified from 911 whole-genome sequences.

. 1000 Genomes Project Consortiu, Andrea Angius, Christopher M. S. Jones, Frederic Reinier

Genome Biology vol. 15 num. 6 - june 2014 doi: 10.1186/gb-2014-15-6-r88

Various talks, works and publications

[6-COU14]

Unravelling the genetic causes of syndromic intellectual disability in the era of exome sequencing

Laura Crisponi, Manuela Oppo, Paolo Uva, Stefano Onano, Alessandro Puddu, Gianmauro Cuccuru, Giorgio Fotia, Ilenia Zara, Frederic Reinier, Riccardo Berutti, Rossano Atzeni, Maria Valentini, Christopher M. S. Jones, Serena Sanna, Alessia Loi, V Dessi, Chiara Perria, Valentina Pes, Gigliola Serra, Stefano Sotgiu, Andrea Angius, Francesco Cucca

Poster presentation at Convegno Nazionale Società Italiana di Genetica Umana SIGU, Il Sequenziamento di Nuova Generazione in Genetica Umana e Medica, Bologna, October 30-31, 2014 - 2014

[6-CRZ14]

P.SER605DEL IN POLD1 E' UNA MUTAZIONE RICORRENTE CAUSA DELLA SINDROME MDPL

Laura Crisponi, Frederic Reinier, Magdalena Zoledziewska, David Hanna, J.D. Smith, Maria Valentini, Ilenia Zara, Riccardo Berutti, Serena Sanna, Manuela Oppo, Roberto Cusano, M.R. Montesu, Christopher M. S. Jones, D. Cerimele, Debby A. Nickerson, F. Cottoni, Andrea Angius, Francesco Cucca

Poster at SIGU2014 Bologna 30-31 October 2014 - 2014

Publications en 2013

Peer-reviewed publications in International Journals

[2-FMA13]

Low-Pass DNA Sequencing of 1200 Sardinians Reconstructs European Y-Chromosome Phylogeny

Paolo Francalacci, Laura Morelli, Andrea Angius, Riccardo Berutti, Frederic Reinier, Rossano Atzeni, Ilenia Zara, Daria Sanna, Antonella Useli, Fabio Busonero, Andrea Maschio, Maria Francesca Urru, Marco Marcelli, Roberto Cusano, Manuela Oppo, Rosella Pilu, Magdalena Zoledziewska, Maristella Pitzalis, Francesca Deidda, Fausto Poddie, Han Kang, Robert Lyons, Brendan Tarrier, Bragg-Gresham J., B Li, Sergio Tofanelli, A. Alonso, Mariano Dei, Sandra Lai, Antonella Mulas, Michael Whalen, Sergio Uzzau, Christopher M. S. Jones, David Schlessinger, Gonçalo R. Abecasis, Serena Sanna, Sidore Carlo, Francesco Cucca

Science pages 565-569 vol. 341 - 2013
issn: 0036-8075 doi: 10.1126/science.1237947

[2-1AJ13]

Integrative annotation of variants from 1092 humans: application to cancer genomics.

. 1000 Genomes Project Consortiu, Andrea Angius, Christopher M. S. Jones, Frederic Reinier

Science Science pages 1-11 vol. 342 num. 6154 - october 2013 doi: 10.1126/science.1235587

[2-OSC13]

Genetic Variants Regulating Immune Cell Levels in Health and Disease

Valeria Orrú, Maristella Steri, Sidore Carlo, Francesca Virdis, Mariano Dei, Sandra Lai, Magdalena Zoledziewska, Fabio Busonero, Antonella Mulas, Matteo Floris, Wieslawa Mentzen, Silvana Urru, michele marongiu, Stefania Olla, MG Piras, Lobina M., Andrea Maschio, Maristella Pitzalis, Maria Francesca Urru, Marco Marcelli, Roberto Cusano, Francesca Deidda, Manuela Oppo, Rosella Pilu, Frederic Reinier, Riccardo Berutti, Luca Pireddu, Ilenia Zara, Eleonora Porcu, Alan Kwong , Christine Brennan , Brendan Tarrier, Hyun Kang , Robert Lyons, Sergio Uzzau, Rossano Atzeni, Maria Valentini, Firinu D., Lidia Leoni, Gianluca Rotta, Silvia Naitza, Andrea Angius, Mauro Congia, Michael Whalen, Christopher M. S. Jones, David Schlessinger, Gonçalo R. Abecasis, Edoardo Fiorillo, Serena Sanna, Francesco Cucca

Cell Elsevier Inc pages 242-256 vol. 155 num. 1 - september 2013 doi: 10.1016/j.cell.2013.08.041

Peer-reviewed publications in international events

[4-PPC13]

Genotype imputation in the era of next-generation sequencing.

Giorgio Pistis, Eleonora Porcu, Sidore Carlo, F Danjou, Maristella Steri, Antonella Mulas, Magdalena Zoledziewska, Fabio Busonero, Frederic Reinier, Rossano Atzeni, Rosella Pilu, Marco Marcelli, Brendan Tarrier, Han Kang, Andrea Angius, Christopher M. S. Jones, David Schlessinger, Francesco Cucca, Serena Sanna

ASHG 2013, Boston, USA, October 22-26 - 2013

[4-PMZ13]

A large-scale transcriptome study in the Sardinian population.

Mauro Pala, Mara Marongiu, Z Zappala, Antonella Mulas, Roberto Cusano, Francesca Crobu, Frederic Reinier, Riccardo Berutti, MG Piras, Christopher M. S. Jones, David Schlessinger, Gonçalo R. Abecasis, Andrea Angius, Serena Sanna, Francesco Cucca, Stephen Montgomery

ASHG 2013, Boston, USA, October 22-26. - 2013

[4-SMZ13]

Sequencing-based GWAS on peripheral blood monocyte counts in the SardiNIA cohort.

Maristella Steri, Antonella Mulas, Magdalena Zoledziewska, Sidore Carlo, Giorgio Pistis, F Danjou, Eleonora Porcu, Mara Marongiu, Fabio Busonero, MG Piras, M. L. Lobina, Frederic Reinier, Riccardo Berutti, Maria Francesca Urru, Andrea Angius, Christopher M. S. Jones, David Schlessinger, Gonçalo R. Abecasis, Serena Sanna, Francesco Cucca

ESHG 2013, Paris, France, June 08-11. - 2013

[4-MPB13]

Whole-exome sequencing in pedigrees segregating Type 1 Diabetes

Elisabetta Mereu, Maristella Pitzalis, Riccardo Berutti, Manuela Oppo, Carlo Sidore, Magdalena Zoledziewska, Laura Crisponi, Maria Valentini, Alessandro Puddu, Ilenia Zara, Francesca Deidda, Frederic Reinier, Renzo Galanello, P. Pusceddu, M. Frongia, Christopher M. S. Jones, Andrea Angius, Serena Sanna, Francesco Cucca

ESHG (European Society of Human Genetics) 2013 - june 2013

Publications en 2012

Peer-reviewed publications in International Journals

[2-PSM12]

Imputation quality thresholds for rare and common variants

Giorgio Pistis, Carlo Sidore, Antonella Mulas, Magdalena Zoledziewska, Riccardo Berutti, Frederic Reinier, Maria Francesca Urru, Andrea Maschio, Marco Marcelli, Andrea Angius, Christopher M. S. Jones, Gonçalo R. Abecasis, Serena Sanna, Francesco Cucca

1000 Genomes Project Community Meeting - july 12-13 - 2012

[2-1AJ12]

An integrated map of genetic variation from 1,092 human genomes

. 1000 Genomes Project Consortiu, Andrea Angius, Christopher M. S. Jones, Frederic Reinier

Nature Nature pages 56-65 vol. 492 num. 7422 - november 2012 doi: 10.1038/nature11632

[2-OFS12]

Genetic factors regulating the levels of immune system cells in health and disease

Valeria Orrú, Edoardo Fiorillo, Maristella Steri, Sole Gabriella, Francesca Virdis, Mariano Dei, Sandra Lai, Antonella Mulas, M. Piras, Lobina M., Mara Marongiu, Mauro Congia, Firinu D., Michael Whalen, Sidore Carlo, Maria Francesca Urru, Fabio Busonero, Frederic Reinier, Marco Marcelli, Rossano Atzeni, Andrea Angius, Christopher M. S. Jones, David Schlessinger, Gonçalo R. Abecasis, Serena Sanna, Francesco Cucca

European Network of Immunology Institutes (ENII) - april 2012

Peer-reviewed publications in international events

[4-SSG12]

Systematic assessment of the immune system by genetic mapping of its quantitative dimensions

Serena Sanna, Maristella Steri, Sole Gabriella, Carlo Sidore, Maria Francesca Urru, Fabio Busonero, Frederic Reinier, Mariano Dei, Sandra Lai, Francesca Virdis, Antonella Mulas, Marco Marcelli, Rossano Atzeni, Andrea Angius, Christopher M. S. Jones, David Schlessinger, Valeria Orrú, Edoardo Fiorillo

European Human Genetics Conference - June - 2012

[4-DUP12]

Application of next generation sequencing to identify causative variant at the BCLA locus

F Danjou, Gianluca Usala, L Perseu, Sidore Carlo, Fabio Busonero, Riccardo Berutti, Frederic Reinier, Andrea Angius, Andrea Maschio, Christopher M. S. Jones, Franco Anni, Stefania Satta, F Demartis, N Ramaiah, Gonçalo R. Abecasis, David Schlessinger, Renzo Galanello, Francesco Cucca, Serena Sanna, Manuela Uda

ESHG 2012, Nürnberg, Germany, June 23 – 26 - 2012

[4-PMM12]

The genetics of gene expression, splicing and transcriptional efficiency through Poly-A selection and ribosomal depletion RNA sequencing in humans.

Mauro Pala, Mara Marongiu, Antonella Mulas, Roberto Cusano, Francesca Crobu, Frederic Reinier, Riccardo Berutti, MG Piras, Christopher M. S. Jones, David Schlessinger, Gonçalo R. Abecasis, Andrea Angius, Serena Sanna, Francesco Cucca, Stephen Montgomery

ASHG 2012, San Francisco, USA, November 06-10. - 2012

[4-SCM12]

On the Sardinian ancestry of the Tyrolean Iceman.

Martin Sikora, Meredith L Carpenter, Andres Moreno-Estrada, Brenna M. Henn, Peter A. Underhill, Ilenia Zara, Maristella Pitzalis, Sidore Carlo, Frederic Reinier, Marco Marcelli, Andrea Angius, Christopher M. S. Jones, Timothy T Harkins, Andreas Keller, Albert Zink, Gonçalo R. Abecasis, Francesco Cucca, Carlos D Bustamante

ASHG 2012, San Francisco, USA, November 06-10. - 2012

[4-CSK12]

Whole Genome Sequencing of 2100 Individuals in the founder Sardinian Population.

Sidore Carlo, Serena Sanna, Alan Kwong , Han Kang, Roberto Cusano, Maristella Pitzalis, Magdalena Zoledziewska, Andrea Maschio, Fabio Busonero, M. L. Lobina, Andrea Angius, Robert Lyons, C Terrier, Christine Brennan , Rossano Atzeni, Antonella Mulas, Mariano Dei, MG Piras, Sandra Lai, Frederic Reinier, Riccardo Berutti, Christopher M. S. Jones, Marco Marcelli, Maria Francesca Urru, Manuela Oppo, David Schlessinger, Gonçalo R. Abecasis, Francesco Cucca

ASHG 2012, San Francisco, USA, November 06-10. - 2012

[4-JSC12]

Heritability of the Variation in Aging in Two Longitudinal Family Cohort Studies: SardiNIA/Progenia Study and Framingham Heart Study.

Bragg-Gresham J., Serena Sanna, Sidore Carlo, Antonella Mulas, Fabio Busonero, Andrea Maschio, Maria Francesca Urru, Frederic Reinier, Riccardo Berutti, Marco Marcelli, Roberto Cusano, Manuela Oppo, Maristella Pitzalis, Magdalena Zoledziewska, Andrea Angius, Christopher M. S. Jones, Antonio Cao, Manuela Uda, Kardia S., David Schlessinger, Francesco Cucca, Gonçalo R. Abecasis

ASHG 2012, San Francisco, USA, November 06-10. - 2012

[4-ZPZ12]

Sequencing-based and multiplatform Genome-Wide Association Study for Multiple Sclerosis and Type 1 Diabetes in Sardinians

Ilenia Zara, Eleonora Porcu, Magdalena Zoledziewska, Maristella Pitzalis, Maria Valentini, Antonella Mulas, Fabio Busonero, Rossano Atzeni, Manuela Oppo, Frederic Reinier, Riccardo Berutti, Rosella Pilu, Francesca Deidda, Carlo Sidore, Roberta Piras, Alessia Loi, Sonia Sanna, Eleonora Cocco, Fausto Poddie, Gabriele Farina, Giulio Rosati, Luca Lianas, Gianmauro Cuccuru, Gianluigi Zanetti, Andrea Angius, Maria Giovanna Marrosu, Christopher M. S. Jones, Gonçalo R. Abecasis, Serena Sanna, Francesco Cucca

ASHG (American Society of Human Genetics) 2012, San Francisco, USA - november 2012

[4-ZOC12]

Unravelling the genetic causes of syndromic Intellectual Disability in the era of exome sequencing

Ilenia Zara, Manuela Oppo, Francesca Chiappe, Frederic Reinier, Riccardo Berutti, Rossano Atzeni, Christopher M. S. Jones, V. Dessì, Gigliola Serra, Maria Valentini, Andrea Angius, Serena Sanna, Francesco Cucca, Laura Crisponi

ESHG (European Society of Human Genetics) 2012, Nuremberg, Germany - june 2012

[4-BRA12]

QCTool: an efficient toolkit to automatically generate quality metrics of next-generation sequencing data.

Riccardo Berutti, Frederic Reinier, Rossano Atzeni, Andrea Angius, Roberto Cusano, Marco Marcelli, Manuela Oppo, Rosella Pilu, Maria Francesca Urru, Maria Valentini, Ilenia Zara, Serena Sanna, Francesco Cucca, Christopher M. S. Jones

ESHG (European Society of Human Genetics) 2012, Nuremberg, Germany - june 2012

Publications en 2011

Peer-reviewed publications in international events

[4-SSB11]

Whole Genome Sequencing of 500 individuals in an Isolated Population

Carlo Sidore, Serena Sanna, Fabio Busonero, W. Chen, Han Kang, C. Fuchsberger, Frederic Reinier, Riccardo Berutti, Maria Francesca Urru, Marco Marcelli, Andrea Maschio, R. Nagaraja, Manuela Uda, David Schlessinger, Christopher M. S. Jones, Francesco Cucca, Gonçalo R. Abecasis

Biology of Genomes Conference - 2011

[4-RBS11]

Likelihood Based Deletion Analysis in a Sample of Sequenced Sardinian Individuals

S. Rashkin, T. Blackwell, Carlo Sidore, Serena Sanna, Fabio Busonero, W. Chen, Han Kang, C. Fuchsberger, Frederic Reinier, Riccardo Berutti, Francesca Deidda, Maria Francesca Urru, Marco Marcelli, Manuela Oppo, Andrea Maschio, Maristella Pitzalis, Magdalena Zoledziewska, Andrea Angius, R. Nagaraja, Manuela Uda, David Schlessinger, Christopher M. S. Jones, Francesco Cucca, Gonçalo R. Abecasis

American Society of Human Genetics/ICHG - Oct 14 - 2011

[4-SSB11]

Whole Genome Sequencing of 1000 individuals in an Isolated Population

Carlo Sidore, Serena Sanna, Fabio Busonero, W. Chen, Han Kang, C. Fuchsberger, Frederic Reinier, Riccardo Berutti, Hovelson D., Maria Francesca Urru, Marco Marcelli, Roberto Cusano, Manuela Oppo, Andrea Maschio, Maristella Pitzalis, Magdalena Zoledziewska, Andrea Angius, R. Nagaraja, Manuela Uda, David Schlessinger, Christopher M. S. Jones

American Society of Human Genetics/ICHG - Oct 14 - 2011

[4-JSS11]

Genetic Associations with the Variation in Aging from the SardiNIA/Progenia Project

Bragg-Gresham J., Serena Sanna, Kardia S., Gonçalo R. Abecasis, Manuela Uda, Francesco Cucca, Antonio Cao, Antonella Mulas, Fabio Busonero, Frederic Reinier, Riccardo Berutti, Andrea Maschio, Maria Francesca Urru, Marco Marcelli, Manuela Oppo, Maristella Pitzalis, Magdalena Zoledziewska, Andrea Angius, Christopher M. S. Jones, David Schlessinger

American Society of Human Genetics/ICHG - Oct 13 - 2011

[4-PMM11]

Large-scale transcriptome study in the Sardinian founder population.

ICHG/ASHG 2011, Montréal, Canada, October 11-15 - 2011

[4-PMM11]

Large-scale transcriptome study in the Sardinian founder population.

ICHG/ASHG 2011, Montréal, Canada, October 11-15 - 2011

[4-ZPZ11]

A genome-wide association study for two autoimmune diseases in Sardinia

Ilenia Zara, Maristella Pitzalis, Magdalena Zoledziewska, Raffaele Murru, Francesca Deidda, Mariano Dei, Sandra Lai, Fausto Poddie, Roberto Cusano, Marco Marcelli, Frederic Reinier, Riccardo Berutti, Carlo Sidore, Maria Valentini, Gabriele Farina, David Schlessinger, Giulio Rosati, Maria Giovanna Marrosu, Serena Sanna, Francesco Cucca

ESHG (European Society of Human Genetics) 2011, Amsterdam, The Netherlands - may 2011

Various talks, works and publications

[6-PLR11]

Scaling with the flow: advantages of a MapReduce-based scalable and high-throughput sequencing workflow

Luca Pireddu, Simone Leo, Frederic Reinier, Riccardo Berutti, Rossano Atzeni, Gianluigi Zanetti

poster - International Conference on Human Genetics (ICHG) 2012, Montreal, Canada - october 2011

Publications en 2008

Various talks, works and publications

[6-ROC08]

Mir*ware: an approach for tissue-oriented micrornas-target mrnas data integration

Frederic Reinier, Massimiliano Orsini, Enrico Capobianco

Poster presented at the Non-Coding RNAs: Computational Challenges and Applications Workshop, 28-30 April, 2008, Antalya, Turkey - 2008

[6-ROC08]

Design and implementation of a micrornas-mrnas cancer warehouse

Frederic Reinier, Massimiliano Orsini, Enrico Capobianco

Poster presented at ECCB 2008, Cagliari, Italy, September - 2008

Publications en 2006

Various talks, works and publications

[6-RRM06]

Setting up a Bioinformatics service Center in a distributed environment

Patricia Rodriguez-Tomé, Frederic Reinier, Joel Pierre Masciocchi, Simone Carcangiu, Giuliana Brunetti

lecture - Invited lecture at the NETTAB'06 workshop, Pula, 10-13 july 2006 - july 2006

35 publications Download the selection