Handbook of Research on Computational Methodologies in Gene Regulatory Networks, IGI Global Das, Sanjoy and Caragea, Doina and Welch, Stephen and Hsu, William H. pages 1-27 chap. 1 Hershey, PA, USA - 2009

[1-DE 09]

Inferring gene regulatory networks from genetical genomics data

Alberto de la Fuente

Handbook of Research on Computational Methodologies in Gene Regulatory Networks, IGI Global Das, Sanjoy and Caragea, Doina and Welch, Stephen and Hsu, William H. pages 79-107 chap. 4 Hershey, PA, USA - 2009

Peer-reviewed publications in International Journals

[2-MFD09]

Dissecting the dynamics of dysregulation of cellular processes in mouse mammary gland tumor

Wieslawa Mentzen, Matteo Floris, Alberto de la Fuente

BMC Genomics vol. 10 num. 601 - 2009 doi: 10.1186/1471-2164-10-601

[2-SMP09]

Inferring gene networks: dream or nightmare? Part 2: challenges 4 and 5

Alan Louis Scheinine, Wieslawa Mentzen, Enrico Pieroni, Giorgio Fotia, Fabio Maggio, Gianmaria Mancosu, Alberto de la Fuente

Annals of the New York Academy of Sciences pages 287-301 vol. 1158 - march 2009 doi: 10.1111/j.1749-6632.2008.04100.x

[2-BMD09]

Inferring gene networks: dream or nightmare? Part 1: challenges 1 and 3

Angela Baralla, Wieslawa Mentzen, Alberto de la Fuente

Annals of the New York Academy of Sciences pages 246-256 vol. 1158 - march 2009 doi: 10.1111/j.1749-6632.2008.04099.x

Various talks, works and publications

[6-PHD09]

Sysgensim: simulating large systems genetics datasets for the evaluation of analysis methods

Andrea Pinna, Ina Hoeschele, Alberto de la Fuente

Contributed poster at the 1st Symposium on Systems Genetics, Groningen (NL), October 2009 - 2009

[6-MFD09]

Dissecting the dynamics of dysregulation of cellular processes in mouse mammary gland tumor

Wieslawa Mentzen, Matteo Floris, Alberto de la Fuente

Poster presented at Intelligent Systems for Molecular Biology (ISMB) - Stockholm, Sweden - june 2009

Publications en 2008

Peer-reviewed publications in International Journals

[2-DFM08]

Insights into biological information processing: structural and dynamical analysis of a human protein signalling network

Alberto de la Fuente, Giorgio Fotia, Fabio Maggio, Gianmaria Mancosu, Enrico Pieroni

Journal of Physics A: Mathematical and Theoretical pages 224013 vol. 41 num. 22 - 2008 doi: 10.1088/1751-8113/41/22/224013

[2-LDH08]

Gene network inference via structural equation modeling in genetical genomics experiments

Bing Liu, Alberto de la Fuente, Ina Hoeschele

Genetics pages 1763-1776 vol. 178 num. 3 - 2008 doi: 10.1534/genetics.107.080069

[2-DMD08]

Towards functional phosphoproteomics by mapping differential phosphorylation events in signaling networks

Sergio de la Fuente van Bentem, Wieslawa Mentzen, Alberto de la Fuente, Heribert Hirt

Proteomics pages 4453-4465 vol. 8 num. 21 - november 2008 doi: 10.1002/pmic.200800175

[2-PDM08]

Protein networking: insights into global functional organization of proteomes

Enrico Pieroni, Sergio de la Fuente van Bentem, Gianmaria Mancosu, Enrico Capobianco, Heribert Hirt, Alberto de la Fuente

Proteomics pages 799-816 vol. 8 num. 4 - february 2008 doi: 10.1002/pmic.200700767

Various talks, works and publications

[6-MFD08]

Network oncology: analysis of cancer gene expression in the context of protein interaction networks and mirna target motifs

Wieslawa Mentzen, Matteo Floris, Alberto de la Fuente

Poster presented at ECCB 2008, Cagliari, Italy, September 22-25 - 2008

[6-MFD08]

Network oncology: analysis of cancer gene expression in the context of protein interaction networks and mirna target motifs

Wieslawa Mentzen, Matteo Floris, Alberto de la Fuente

Poster presented at the International Conference on Systems Biology (ISMB), 2008, Goteborg, Sweden - 2008

Publications en 2007

Peer-reviewed publications in International Journals

[2-VVG07]

Genome-wide partial correlation analysis of Escherichia coli microarray data

Diogo F. T. Veiga, Fábio F. R. Vicente, Marco Grivet, Alberto de la Fuente, Ana Tereza R. Vasconcelos

Genetics and Molecular Research pages 730-742 vol. 6 num. 4 - 2007

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