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Publications in 2020

Peer-reviewed publications in international events

[4-MFU20]

The openEHR Genomics Project

Cecilia Mascia, Francesca Frexia, Paolo Uva, Gianluigi Zanetti, Luca Pireddu, Gideon Giacomelli, Christina Jaeger-Schmidt, Aurelie Tomczak, Simon Schumacher, Florian Kraecher, Roland Eils, Silje Ljosland Bakke, Heather Leslie

Digital Personalized Health and Medicine - Proceedings of MIE 2020 IOS Press Studies in Health Technology and Informatics pages 443 - 447 vol. Volume 270 European Federation for Medical Informatics (EFMI) - 2020 doi: 10.3233/SHTI200199

[4-MFU20]

The openEHR Genomics Project

Various talks, works and publications

[6-WHG20]

ISO 23494: Biotechnology – Provenance Information Model for Biological Specimen and Data

Rudolf Wittner, Petr Holub, Jörg Geiger, Carole Goble, Heimo Müeller, Stian Soiland-Reyes, Elliot Fairweather, Luca Pireddu, Francesca Frexia, Cecilia Mascia, Gianluigi Zanetti, Caterina Strambio, Josh Moore, David Grunwald, Jason R. Swedlow

Poster - ProvenanceWeek 2020 - june 2020

Publications in 2019

Books and Book Chapters

[1-FMD19]

CRS4 Telemed: Open and Low-Cost Technologies for Real-Time Telesonography

Francesca Frexia, Vittorio Meloni, Mauro Del Rio, Gianluigi Zanetti

Innovative Technologies and Signal Processing in Perinatal Medicine, Springer - 2019

Peer-reviewed publications in International Journals

[2-ZZB19]

Estimation of Relative and Absolute Risks in a Competing-Risks Setting Using a Nested Case-Control Study Design: Example From the ProMort Study

Renata Zelic, Daniela Zugna, Matteo Bottai, Ove Andrén, Jonna Fridfeldt, Jessica Carlsson, Sabina Davidsson, Valentina Fiano, Michelangelo Fiorentino, Francesca Giunchi, Chiara Grasso, Luca Lianas, Cecilia Mascia, Luca Molinaro, Gianluigi Zanetti, Lorenzo Richiardi, Andreas Pettersson, Olof Akre

American Journal of Epidemiology Oxford Academic pages 1165–1173 vol. 188 num. 6 - june 2019 doi: 10.1093/aje/kwz026

[2-KMB19]

Interoperable and scalable data analysis with microservices: Applications in Metabolomics

Payam Emami Khoonsari, Pablo Moreno, Sven Bergmann, Joachim Burman, Marco Capuccini, Matteo Carone, Marta Cascante, Pedro de Atauri, Carles Foguet, Alejandra N. Gonzalez-Beltran, Thomas Hankemeier, Kenneth Haug, Sijin He, Stephanie Herman, David Johnson, Namrata Kale, Anders Larsson, Steffen Neumann, Kristian Peters, Luca Pireddu, Philippe Rocca-Serra, Pierrick Roger, Rico Rueedi, Noureddin Sadawi, Reza M. Salek, Susanna-Assunta Sansone, Daniel Schober, Vitaly Selivanov, Etienne A. Thévenot, Michael van Vliet, Gianluigi Zanetti, Christoph Steinbeck, Kim Kultima, Ola Spjuth

Bioinformatics Oxford University Press - march 2019 doi: 10.1093/bioinformatics/btz160

[2-KMZ19]

A Poiseuille viscometer for lattice gas automata

Leo P. Kadanoff, Guy McNamara, Gianluigi Zanetti

Lattice Gas Methods for Partial Differential Equations CRC Press pages 385-397 - march 2019

Peer-reviewed publications in international events

[4-GBP19]

TDM Edge Gateway: a flexible microservice-based edge gateway architecture for heterogeneous sensors.

Massimo Gaggero, Giovanni Busonera, Luca Pireddu, Gianluigi Zanetti

Euro-Par 2019: Parallel Processing Workshops - 2019

[4-GBP19]

TDM Edge Gateway: a flexible microservice-based edge gateway architecture for heterogeneous sensors

Massimo Gaggero, Giovanni Busonera, Luca Pireddu, Gianluigi Zanetti

Proceedings of the second Managed Fog-to-Cloud Workshop Springer - 2019

[4-PPM19]

Container Orchestration on HPC Clusters

Marco Enrico Piras, Luca Pireddu, Marco Moro, Gianluigi Zanetti

ISC High Performance 2019 International Workshops Springer Lecture Notes in Computer Science pages 25--35 vol. 11887 - june 2019

Peer-reviewed publications in national events

[5-ABG19]

Deep Learning e calcolo ad alte prestazioni per l’elaborazione di immagini biomediche

Marco Aldinucci, Claudio Berzovini, Costantino Grana, Marco Grangetto, Luca Pireddu, Gianluigi Zanetti

Convegno Nazionale CINI sull'Intelligenza Artificiale - 2019 - march 2019

Various talks, works and publications

[5-BBC19]

TDM: un sistema aperto per l'acquisizione di dati, l'analisi e la simulazione su scala metropolitana

Fabio Bettio, Giovanni Busonera, Marco Cogoni, Roberto Deidda, Mauro Del Rio, Massimo Gaggero, Enrico Gobbetti, Simone Leo, Simone Manca, Marino Marrocu, Luca Massidda, Fabio Marton, Marco Enrico Piras, Luca Pireddu, Gabriella Pusceddu, Alessandro Seoni, Gianluigi Zanetti

Proc. GARR 2019 - Selected Papers pages 44--49 GARR - 2019 doi: 10.26314/GARR-Conf19-proceedings-09

[6-FUF19]

I FAIR the Sardinian way to support and fund Indipendent clinical studies that want to be Findable, Accessible, Interoperable, and Reusable

Francesca Frexia, Paolo Uva, Giorgio Fotia, Gianluigi Zanetti, Ernesto DAloja, Franco Cappai, Caterina Carboni

Abstract - 2019

[6-FMU19]

Open standards for semantic interoperability of clinical and genomic data: a proof-of-concept bridging openEHR, Phenopacket and FHIR

Francesca Frexia, Cecilia Mascia, Paolo Uva, Luca Lianas, Giovanni Delussu, Gianluigi Zanetti, Heather Leslie, Silje Ljosland Bakke, Ian McNicoll, Gideon Giacomelli, Diego Boscà

Poster - Poster - GA4GH Plenary Meeting - october 2019

[6-VPZ19]

Stream processing of genomic data

Francesco Versaci, Luca Pireddu, Gianluigi Zanetti

Invited talk - ScalPerf19-Scalable Approaches to High Performance and High Productivity Computing, Bertinoro - september 2019

[6-UMF19]

Open issues in genomics data management

Paolo Uva, Cecilia Mascia, Francesca Frexia, Gianluigi Zanetti

Oral presentation at openEHR for clinical research applications workshop, Pula, Cagliari, June 5, 2019 - june 2019

Publications in 2018

Peer-reviewed publications in International Journals

[2-BCP18]

EEG Spectral Coherence Analysis in Nocturnal Epilepsy

Giovanni Busonera, Marco Cogoni, Monica Puligheddu, Raffaele Ferri, Giulia Milioli, Liborio Parrino, Francesco Marrosu, Gianluigi Zanetti

IEEE Transactions on Biomedical Engineering IEEE - 2018 doi: 10.1109/TBME.2018.2814479

[2-PBB18]

PhenoMeNal: processing and analysis of metabolomics data in the cloud

Kristian Peters, James Bradbury, Sven Bergmann, Marco Capuccini, Marta Cascante, Pedro de Atauri, Timothy Ebbels, Carles Foguet, Robert Glen, Alejandra N. Gonzalez-Beltran, Ulrich L Günther, Evangelos Handakas, Thomas Hankemeier, Kenneth Haug, Stephanie Herman, Petr Holub, Massimiliano Izzo, Daniel Jacob, David Johnson, Fabien Jourdan, Namrata Kale, Ibrahim Karaman, Bita Khalili, Payam Emami Khoonsari, Kim Kultima, Samuel Lampa, Anders Larsson, Christian Ludwig, Pablo Moreno, Steffen Neumann, Jon Ander Novella, Claire O Donovan, Jake TM Pearce, Alina Peluso, Marco Enrico Piras, Luca Pireddu, Michelle AC Reed, Philippe Rocca-Serra, Pierrick Roger, Antonio Rosato, Rico Rueedi, Christoph Ruttkies, Noureddin Sadawi, Reza M. Salek, Susanna-Assunta Sansone, Vitaly Selivanov, Ola Spjuth, Daniel Schober, Etienne A. Thévenot, Mattia Tomasoni, merlijn van Rijswijk, Michael van Vliet, Mark Viant, Ralf Weber, Gianluigi Zanetti, Christoph Steinbeck

GigaScience Oxford University Press vol. 8 - 2018
issn: 2047-217X doi: 10.1093/gigascience/giy149

[2-MUL18]

OpenEHR modeling for genomics in clinical practice

Cecilia Mascia, Paolo Uva, Simone Leo, Gianluigi Zanetti

International Journal of Medical Informatics Elsevier pages 147 - 156 vol. 120 - october 2018
issn: 1386-5056 doi: 10.1016/j.ijmedinf.2018.10.007

[2-HKP18]

Enhancing Reuse of Data and Biological Material in Medical Research: From FAIR to FAIR-Health

Petr Holub, Floriant Kohlmayer, Fabian Prasser, Michaela Th. Mayrhofer, Irene Schlünder, Gillian M. Martin, Sara Casati, Lefteris Koumakis, Andrea Wutte, Lukasz Kozera, Dominik Strapagiel, Gabriele Anton, Gianluigi Zanetti, Osman Ugur Sezerman, Maimuna Mendy, Dalibor Valik, Marialuisa Lavitrano, Georges Dagher, Kurt Zatloukal, GertJan B. van Ommen, Jan-Eric Litton

Biopreservation and Biobanking vol. 16 num. 2 - april 2018 doi: 10.1089/bio.2017.0110

Display the complete list (194 publications) Download the list

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