CRS4

Publications de Soiland-reyes au CRS4


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16 publications Download the selection

Publications en 2024
Peer-reviewed publications in International Journals
[2-LCR24] [Add to your selection]
Recording provenance of workflow runs with RO-Crate
Simone Leo, Michael R Crusoe, Laura Rodriguez Navas, Raül Sirvent, Alexander Kanitz, Paul De Geest, Rudolf Wittner, Luca Pireddu, Daniel Garijo, Jose Maria Fernandez, Iacopo Colonnelli, Matej Gallo, Tazro Ohta, Hirotaka Suetake, Salvador Capella-Gutierrez, Renske de Wit, Bruno P. Kinoshita, Stian Soiland-Reyes
PLoS ONE Public Library of Science pages e0309210 vol. 19 num. 9 - september 2024  doi: 10.1371/journal.pone.0309210
 
Publications en 2023
Peer-reviewed publications in International Journals
[2-WHM23] [Add to your selection]
Toward a common standard for data and specimen provenance in life sciences [Download PDF version]
Rudolf Wittner, Petr Holub, Cecilia Mascia, Francesca Frexia, Heimo Müeller, Markus Plass, Clare Allocca, Fay Betsou, Tony Burdett, Ibon Cancio, Adriane Chapman, Mélanie Courtot, Vasa Curcin, Johann Eder, Mark Elliot, Katrina Exter, Carole Goble, Martin Golebiewski, Bron Kisler, Andreas Kremer, Simone Leo, Sheng Lin-Gibson, Anna Marsano, Marco Mattavelli, Josh Moore, Hiroki Nakae, Isabelle Perseil, Ayat Salman, James Sluka, Stian Soiland-Reyes, Caterina Strambio, Michael Sussman, Jason R. Swedlow, Kurt Zatloukal, Jörg Geiger
Learning Health Systems pages e10365 - april 2023  doi: 10.1002/lrh2.10365
Peer-reviewed publications in international events
[4-GBS23] [Add to your selection]
The EOSC-Life Workflow Collaboratory for the Life Sciences [Download PDF version]
Carole Goble, Finn Bacall, Stian Soiland-Reyes, Stuart Owen, Ignacio Eguinoa, Bert Droesbeke, Herve Menager, Laura Rodriguez Navas, Jose Maria Fernandez, Bjorn Gruning, Simone Leo, Luca Pireddu, Michael R Crusoe, Johan Gustafsson, Salvador Capella-Gutierrez, Frederik Coppens
Proceedings of the 1st Conference on Research Data Infrastructure (CoRDI) - Connecting Communities TIB Open Publishing vol. 1 York Sure-Vetter, Carole Goble - september 2023
issn: 2941-296X  doi: 10.52825/cordi.v1i.352
Various talks, works and publications
[6-LCR23] [Add to your selection]
Recording provenance of workflow runs with RO-Crate
Simone Leo, Michael R Crusoe, Laura Rodriguez Navas, Raül Sirvent, Alexander Kanitz, Paul De Geest, Rudolf Wittner, Luca Pireddu, Daniel Garijo, Jose Maria Fernandez, Iacopo Colonnelli, Matej Gallo, Tazro Ohta, Hirotaka Suetake, Salvador Capella-Gutierrez, Renske de Wit, Bruno P. Kinoshita, Stian Soiland-Reyes
preprint - arXiv - december 2023
[6-GBS23] [Add to your selection]
WorkflowHub – a fair registry for workflows
Carole Goble, Finn Bacall, Stian Soiland-Reyes, Stuart Owen, Ignacio Eguinoa, Bert Droesbeke, Herve Menager, Laura Rodriguez Navas, Jose Maria Fernandez, Salvador Capella-Gutierrez, Michael R Crusoe, Bjorn Gruning, Simone Leo, Luca Pireddu, Marco Enrico Piras, Johan Gustafson, Phil Ewels, WorkflowHub Community, Frederik Coppens
Poster - ELIXIR All Hands 2023 - june 2023
[6-LRF23] [Add to your selection]
Making workflow provenance FAIR across workflow systems with Workflow Run RO-Crate
Simone Leo, Laura Rodriguez Navas, Jose Maria Fernandez, Paul De Geest, Luca Pireddu, Michael R Crusoe, Daniel Garijo, Iacopo Colonnelli, Raül Sirvent, Stian Soiland-Reyes
Poster - ELIXIR All Hands 2023 - june 2023
[6-SLC23] [Add to your selection]
Sharing data as machine-actionable objects using RO-Crate, Bioschemas and Signposting
Stian Soiland-Reyes, Simone Leo, Leyla Jael Castro, Peter Sefton, Carole Goble
Poster - ELIXIR All Hands 2023 - june 2023
 
Publications en 2022
Peer-reviewed publications in International Journals
[2-SSC22] [Add to your selection]
Packaging research artefacts with RO-Crate
Stian Soiland-Reyes, Peter Sefton, Mercè Crosas, Leyla Jael Castro, Frederik Coppens, Jose Maria Fernandez, Daniel Garijo, Bjorn Gruning, Marco La Rosa, Simone Leo, Eoghan Ó Carragáin, Marc Portier, Ana Trisovic, RO-Crate Community, Paul Groth, Carole Goble
Data Science IOS Press pages 97-138 vol. 5 num. 2 - july 2022  doi: 10.3233/DS-210053
Various talks, works and publications
[2-SSC22] [Add to your selection]
Creating lightweight FAIR Digital Objects with RO-Crate
Stian Soiland-Reyes, Peter Sefton, Leyla Jael Castro, Frederik Coppens, Daniel Garijo, Simone Leo, Marc Portier, Paul Groth
Research Ideas and Outcomes Pensoft Publishers pages e93937 vol. 8 - 2022  doi: 10.3897/rio.8.e93937
[2-DCS22] [Add to your selection]
Enhancing RDM in Galaxy by integrating RO-Crate
Paul De Geest, Frederik Coppens, Stian Soiland-Reyes, Ignacio Eguinoa, Simone Leo
Research Ideas and Outcomes Pensoft Publishers pages e95164 vol. 8 - 2022  doi: 10.3897/rio.8.e95164
[6-GBS22] [Add to your selection]
The WorkflowHub: A FAIR Registry for Workflows
Carole Goble, Finn Bacall, Stian Soiland-Reyes, Stuart Owen, Alan Williams, Ignacio Eguinoa, Bert Droesbeke, Herve Menager, Laura Rodriguez Navas, Jose Maria Fernandez, Salvador Capella-Gutierrez, Michael R Crusoe, Bjorn Gruning, Simone Leo, Luca Pireddu, Johan Gustafson, Phil Ewels, WorkflowHub Community, Frederik Coppens
Poster - ELIXIR All Hands 2022 - june 2022
 
Publications en 2021
Peer-reviewed publications in international events
[4-WHM21] [Add to your selection]
ISO 23494: Biotechnology -- Provenance Information Model for Biological Specimen And Data
Rudolf Wittner, Petr Holub, Heimo Müeller, Carole Goble, Stian Soiland-Reyes, Luca Pireddu, Francesca Frexia, Cecilia Mascia, Elliot Fairweather, Jason R. Swedlow, Josh Moore, Caterina Strambio, David Grunwald​, Hiroki Nakae
Provenance and Annotation of Data and Processes Springer International Publishing pages 222--225 Cham - 2021
isbn: 978-3-030-80960-7  doi: 10.1007/978-3-030-80960-7_16
Various talks, works and publications
[6-SSC21] [Add to your selection]
Packaging research artefacts with RO-Crate
Stian Soiland-Reyes, Peter Sefton, Mercè Crosas, Leyla Jael Castro, Frederik Coppens, Jose Maria Fernandez, Daniel Garijo, Bjorn Gruning, Marco La Rosa, Simone Leo, Eoghan Ó Carragáin, Marc Portier, Ana Trisovic, RO-Crate Community, Paul Groth, Carole Goble
Article - arXiv - august 2021
[6-GBS21] [Add to your selection]
The WorkflowHub: A FAIR Registry for Workflows and Workflow Research Objects
Carole Goble, Finn Bacall, Stian Soiland-Reyes, Stuart Owen, Alan Williams, Ignacio Eguinoa, Bert Droesbeke, Herve Menager, Laura Rodriguez Navas, Jose Maria Fernandez, Salvador Capella-Gutierrez, Michael R Crusoe, Bjorn Gruning, Simone Leo, Luca Pireddu, Johan Gustafson, Phil Ewels, WorkflowHub Community, Frederik Coppens
Poster - BOSC 2021 - july 2021
 
Publications en 2020
Various talks, works and publications
[6-GBS20] [Add to your selection]
The WorkflowHub: A FAIR registry for Workflows and Workflow Research Objects
Carole Goble, Finn Bacall, Stian Soiland-Reyes, Stuart Owen, Alan Williams, Ignacio Eguinoa, Bert Droesbeke, Flora DAnna, Herve Menager, Laura Rodriguez Navas, Jose Maria Fernandez, Ivan Topolsky, Alban Gaignard, Bjoern Gruening, Simone Leo, Luca Pireddu, Phil Ewels, Maciek Bak, Salvador Capella-Gutierrez, Michael R Crusoe, Frederik Coppens
Poster - International FAIR Convergence Symposium 2020 - november 2020
[6-WHG20] [Add to your selection]
ISO 23494: Biotechnology – Provenance Information Model for Biological Specimen and Data
Rudolf Wittner, Petr Holub, Jörg Geiger, Carole Goble, Heimo Müeller, Stian Soiland-Reyes, Elliot Fairweather, Luca Pireddu, Francesca Frexia, Cecilia Mascia, Gianluigi Zanetti, Caterina Strambio, Josh Moore, David Grunwald​, Jason R. Swedlow
Poster - ProvenanceWeek 2020 - june 2020

16 publications Download the selection